This is blowing my mind - specialy after reading your post - I too have an E40D , just cleaned my MAF and new filter and reset the computer per instuctions and now my trans slipping problem went away. I've been babying it for 2 months now. I don't get it?
Most common "Clunking" issue is spline to shaft grease - the lack of. Theres a TSB on it -
FORD:
1998-2004 F-150
ISSUE
Some 1998-2004 F-150 4X4 vehicles with a one piece drive shaft may exhibit a clunking or grunting noise and/or a shudder sensation from the driveline. The condition will typically occur during fight to moderate acceleration from a stop and/or braking. This may be caused by the slip yoke not sliding smoothly on the transfer case output shaft splines.
ACTION
To service, lubricate the slip yoke with Teflon Grease (D2AZ-19590-A). Refer to the following Service Procedure.
SERVICE PROCEDURE
1. Road test the vehicle to verify the condition.
2. Remove the driveshaft per Section 205-01 of the Workshop Manual.
NOTE INDEX (MARK) THE DRIVESHAFT YOKE TO AXLE FLANGE FOR REASSEMBLY.
3. Lubricate the slip yoke with 7-13 grams (0.25-0.46 oz.) of Teflon Grease (D2AZ-19590-A).
4. Re-index and reinstall the driveshaft per Workshop Manual.
5. Check the transfer case fluid level and add MERCON Automatic Transmission Fluid XT-2-QDX if necessary.
6. Road test to verify the condition is corrected.
Parts Block
OTHER APPLICABLE ARTICLES: NONE
WARRANTY STATUS: Eligible Under Provisions Of New Vehicle Limited Warranty Coverage
OPERATION DESCRIPTION TIME
040106A Lubricate The Slip Yoke 1.0 Hr.
With Teflon Grease
Vehicles With One-Piece
Driveshaft (Includes Time
To Remove And Install
Driveshaft)
DEALER CODING
CONDITION
BASIC PART NO. CODE
4602 42
Good Luck
