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Sounds like the same thing my truck did when I installed a program from a tuner. He made the shifts too stiff. Under light to medium throttle, 1-2 shift was good, 2-3 was good, but the next shift seems to be a combination of trying to lock the torque converter and trying to shift all at once, resulting in a jolt like someone rear-ended the truck. It did not happen when I locked out O/D, let it shift into third, lock the torque converter, and then let it go to O/D. It did not happen when I accelerated hard.
The tuner had to back off the shift pressures and stuff to make it better again. Maybe it is something that a tuner could fix, but would be hard for them to do unless they were there in person or you could datalog and send them the info.
It is probably softer when the truck is cold because the tranmission has a sort of "safe mode." Below 160 degrees the transmission runs a different shift program.
I don't have any experience with the shift kit though, may want to call transgo if their product caused the problem.
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2006 F150 FX4 Super Crew - 5100's leveled 2", 35" BFG KM2's, AEM Brute Force Intake, Xcal 2 (VMP), 15% tint, ARE Z-Series, Hella Heads...
2003 VW Jetta GLI VR6 six speed, 2" drop on 18's, eibach sway bars, magnaflow catback
My Trucks
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